Computational Biologist Jobs

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Computational Biologist, Synthetic Spatial Omics

BiohubNew York, NY
$153,000 - $191,000Hybrid

About The Position

The newly established Laboratory of Synthetic Spatial Omics at CZ Biohub NY advances our understanding of engineered immune cell function within their native microenvironment to design better cell therapeutic approaches. Toward this goal, we develop and integrate state-of-the-art immune cell engineering, imaging-based and sequencing-based multi-omics, and machine learning/AI frameworks. We bring together scientists with diverse expertise to pursue highly interdisciplinary scientific challenges. We are seeking a creative and highly collaborative Computational Biologist to develop and apply computational methods for imaging-based multi-omics datasets generated in the laboratory. The primary focus of this position will be to uncover interpretable relationships among molecular state, cellular morphology, subcellular organization, engineered design, and tissue context in endogenous and engineered immune cells. The successful candidate will work closely with experimental scientists to shape studies, design analytical strategies, and drive projects from experimental planning through biological interpretation and publication. This position offers the opportunity to develop novel computational frameworks at the intersection of spatial omics, synthetic biology, immunology, and machine learning.

Requirements

  • PhD in Computational Biology, Computer Science, Biomedical Engineering, or a closely related discipline.
  • Minimum 2 years of experience in developing AI/ML-based computational frameworks.
  • Strong programming skills in Python, R, or a comparable scientific computing environment.
  • Strong track record of research productivity, including publications, and close collaboration with experimental scientists.
  • Solid foundation in cell biology and genomics.
  • Ability to independently design rigorous computational frameworks, troubleshoot complex workflows, and drive projects to completion.
  • Collaborative mindset and strong scientific communication skills.

Nice To Haves

  • Evidence of methodological creativity through the development of computational methods, software, or novel analytical frameworks.
  • Experience analyzing multiplexed microscopy, tissue imaging, or imaging-based spatial omics data.
  • Experience with cell segmentation, representation learning, spatial statistics, morphological profiling, or subcellular image analysis.
  • Experience analyzing single-cell, perturbation, or multimodal omics datasets.
  • Experience with computational protein design, de novo receptor design, transcriptional regulation, or synthetic protein circuits.
  • Familiarity with immunology, engineered immune cells, or synthetic biology.

Responsibilities

  • Lead the computational analysis of multiplexed imaging, spatial omics, and other high-dimensional datasets generated from endogenous and engineered immune cells.
  • Develop novel computational and machine-learning approaches to identify interpretable biological, organizational, and regulatory principles from cellular morphology, molecular state, subcellular organization, and spatial context.
  • Build models that predict molecular states, functional outcomes, or perturbation responses from imaging and multimodal measurements.
  • Work closely with experimental scientists to design studies, define controls, establish quantitative benchmarks, and iteratively improve experimental and computational workflows.
  • Develop robust, reproducible, and scalable analysis pipelines and software.
  • Depending on expertise, contribute to the computational design or evaluation of synthetic receptors, transcription factors, protein circuits, and other programmable molecular components.
  • Contribute to preprints, publications, presentations, and open science practices.

Benefits

  • Generous employer match on employee 401(k) contributions
  • Paid time off to volunteer
  • Funding for select family-forming benefits
  • Relocation support

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What This Job Offers

Job Type

Full-time

Career Level

Mid Level

Education Level

Ph.D. or professional degree

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Based on current job postings on Teal, the average Computational Biologist salary in the US is approximately $140,000 per year, with a typical range of $72,000 to $228,000.
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