Software Developer - Genomics & Bioinformatics

Boyce Thompson Institute for Plant Research•Ithaca, NY

3d•Onsite

About The Position

The Buckler Lab at the Boyce Thompson Institute (BTI) seeks a skilled Software Developer to join our dynamic team focused on plant genetics, genomics, bioinformatics, and AI research. Our lab, based at BTI, Cornell, and USDA-ARS, conducts cutting-edge research working to address three main questions: How can we use genetics to make agriculture more efficient and share those efficiencies globally? How can we reduce the impact of agriculture on the environment? How does genetic variation give rise to phenotypic variation? Our development team creates and maintains cutting-edge software and AI tools for genomic analysis and data management, serving our laboratory, plant breeding programs, and the broader genetics research community.

Requirements

Bachelor's degree in Computer Science, Bioinformatics, or related field
2-4 years of professional software development experience
Proficiency in Java, Kotlin, and/or Python
Experience with SQL databases (PostgreSQL, SQLite, etc.)
Hands-on experience with containerization technologies (Docker, Singularity, Conda, or Pixi)
Strong version control skills using Git
Familiarity with Agile development methodologies and collaborative workflows
Proficiency in Linux environments
Excellent written and verbal communication skills with ability to explain complex concepts
Demonstrated ability to write clean, scalable, and modular code
Strong organizational and time management capabilities
Collaborative mindset with ability to work effectively in diverse, interdisciplinary teams
Commitment to continuous learning and professional development

Nice To Haves

Advanced degree (MS/PhD) in relevant field
Experience with modern web technologies (JavaScript, React, Node.js)
Background in full-stack development and web service deployment
Educational background or demonstrated interest in biology, genetics, or related sciences
Experience in scientific computing or bioinformatics applications
Experience in developing and deploying AI models and tools

Responsibilities

Develop new features and enhance existing genomic analysis software tools
Maintain and optimize legacy systems to ensure continued functionality
Collaborate with researchers and external partners to identify requirements and implement solutions
Conduct thorough unit testing and participate in code review processes
Lead development initiatives on assigned projects under senior developer guidance
Prepare technical demonstrations for internal teams and external collaborators
Work collaboratively within a multi-developer team environment