Senior Computational Biologist

Probably Genetic•San Francisco, CA
•$160,000 - $200,000•Hybrid

About The Position

Probably Genetic is hiring a Senior Computational Biologist to own the end-to-end processing and interpretation of its genetic data. The company has built a deeply phenotyped genetic disease cohort by helping patients access genetic testing and is using this database for target discovery. The role will take data from quality control through positive-control recovery to novel causal and direction-of-effect target hypotheses, and will help guide which new data modalities the company collects. Results will also support machine-learning researchers training models on multimodal data and advancing target discovery. This is a hands-on, first-of-its-kind role reporting to the VP of R&D.

Requirements

  • PhD in statistical genetics, computational biology, bioinformatics, or a similar field, plus at least 4 years of post-PhD experience in academia or industry.
  • A proven track record, demonstrated through shareable projects or publications, of hands-on experience processing, analyzing, and interpreting genetic or genomic data.
  • Working knowledge of public human genetic and functional genomics resources such as gnomAD, GTEx, Open Targets, and ClinVar.
  • Strong Python skills.
  • Experience with workflow managers such as Snakemake.
  • Comfort working with cloud-scale genomic data resources.
  • Sufficient machine-learning fluency to collaborate closely, support data preparation, and participate in productive discussions.
  • Empathy and respect for patients, including marginalized populations.
  • Patient-focused motivation to develop treatments and make a lasting positive impact.
  • Comfort working in a fast-paced, often ambiguous environment with rapid change.
  • Action-oriented approach and enthusiasm for building a company from the ground up.

Nice To Haves

  • Target discovery or human genetics experience in biotech or biopharma.
  • Experience with genetic disease and/or disease-enriched cohorts.
  • Multimodal or multi-omics experience, such as transcriptomics or proteomics.

Responsibilities

  • Take over, improve, and fully automate the in-house genetic data analysis pipeline, including data processing and quality control.
  • Run power analyses and use the findings to inform phenotype and indication prioritization, database scaling, and data modality collection.
  • Demonstrate that the data and pipelines recover known gene-phenotype associations and approved target-indication pairs, and replicate findings against public resources.
  • Conduct association and causal gene mapping in a selected indication, including rare variant burden, colocalization, and Mendelian randomization analyses.
  • Partner with machine-learning researchers on data preparation, multimodal integration, and shared evaluation.
  • Hand off prioritized targets for wet-lab validation and inform in-vitro experimental plans and priorities.

Benefits

  • Competitive compensation and early-stage equity grants.
  • Generous flexible time off.
  • Parental leave benefits: 12 weeks for both birthing and non-birthing parents.
  • Hybrid, flexible work with autonomy.
  • Pet-friendly office in Downtown San Francisco near transit.
  • Company-sponsored team lunch every Thursday.
  • Work-from-anywhere policy for up to four weeks per year.
  • Regular team retreats.
  • Medical, dental, and vision coverage.
  • Therapy benefits.
  • Flexible spending account (FSA).
  • 401(k).

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What This Job Offers

Job Type

Full-time

Career Level

Senior

Education Level

Ph.D. or professional degree

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