Research Scientist/Engr 1

University of WashingtonSeattle, WA
Onsite

About The Position

The Research Scientist 1 (RS1) will join a predominantly wet-lab group founded on the belief that experimentation can not only be used to analyze protein designs, but generate data to improve existing models so designed proteins are better in the first place. We create and implement workflows to reduce the protein build and test burden, in order to increase the throughput and speed of generating standardized and high quality functional data on protein designs. Our work sits at the intersection of wet lab techniques, semi-automation hardware, and computation, with a focus on increasing efficiency and capacity. We are increasingly incorporating machine learning models into our design-build-test iterations to predict protein function. The group is predominantly focused on enzymes, but often touches other modalities such as binding. Example projects include: ML-guided iterative enzyme evolution, Novel recombinase testing and optimization, and Molecular biology assay development & execution for high-throughput DNA assembly. Lastly, an important aspect woven into all of this work is that, as part of an academic institution, the IPD strives to develop great scientists in addition to great science.

Requirements

  • Bachelor's Degree in Biochemistry, Biology, or related field and one year of relevant Biochemistry experience.
  • Substantial molecular biology and/or protein biochemistry wet-lab experience
  • Demonstrated ability for high-quality, reproducible experimental work
  • Experience with the execution and optimization of higher throughput molecular biology or protein workflows
  • Experience with automated or semi-automated systems for high-throughput data generation
  • Eagerness and ability to learn and engage in new topics and scientific domains
  • Self-motivated and self-directed
  • Organizational aptitude to work on multiple concurrent projects.

Nice To Haves

  • Computational biology/programming experience

Responsibilities

  • Scientific platform development and project execution (65%) - end-to-end implementation of high-throughput workflows to generate protein functional data
  • Contribution to the development of robust and high-throughput workflows to assay protein function
  • Execution of standard molecular biology and protein protocols
  • Writing and troubleshooting of protocols
  • Data curation and analysis (15%) - analysis of experimental data in a standardized format
  • Deposition of data in centralized data repository
  • Gain insights with data to inform future experiments
  • Execution of machine learning scripts
  • Support the continued development of our internal results database
  • Coordination and communication (10%) - engagement with IPD colleagues and external partners to discuss project plans and results
  • Contribute to publications
  • Training (5%) - train IPD colleagues on experimental workflows and equipment
  • Wet lab organization and maintenance (5%) - work with IPD colleagues to ensure lab is well-organized and that instruments are maintained for proper performance

Benefits

  • Benefits: For information about benefits for this position, visit https://www.washington.edu/jobs/benefits-for-uw-staff/
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