Research Scientist III / Senior Research Scientist

Sapient•San Diego, CA

1d•$85,000 - $115,000•Onsite

About The Position

We are in search of a Research Scientist II|/Senior Research Scientist with expertise primarily in proteomics workflows for complex matrices (e.g., biosamples) to join our interdisciplinary bioanalytical team here at Sapient. As an RSIII/SRS, you will be responsible for performing laboratory experiments such as the preparation of clinical and biological samples for global/targeted proteomics analyses using medium to high throughput liquid chromatography mass spectrometry instrumentation.

Requirements

Experience with size exclusion chromatography, nanoparticle and other proteomics enrichment preparations, BCA and SPE techniques.
Familiarity with mass spectrometry techniques (preferably untargeted LC-MS, however targeted LC-MS is also favorable) and working in a BSL2/BSL2+ environment.
Experience with custom data workflows and data analysis required (i.e., Skyline, Specronaut, mzmine)
Bachelor's degree in biology, Biochemistry, Chemistry, or a related Life Science field and 3+ years of related work experience or a master’s degree with 1 year of related work experience.

Responsibilities

Prepares samples using techniques such as size exclusion chromatography, nanoparticle enrichment and solid phase extraction
Prepares protein samples from a wide range of specimens (e.g., cells, tissue, biofluids, recombinant proteins) for discovery and targeted proteomics analysis
Conducts global proteome profiling by data-dependent (DDA) and data-independent (DIA) acquisition mass spectrometry, as well as experiments for post-translational modifications (e.g., phosphorylation, acetylation).
Conducts relative and absolute quantitative analysis using Parallel Reaction Monitoring (PRM) mass spectrometry.
Uses key software tools for proteomics data analysis (e.g., Spectronaut, Skyline, MSFragger)
Independently operates laboratory equipment and performs basic troubleshooting and routine maintenance on instruments (e.g., timsTOF Pro 2, Thermo Stellar)
Assists with developing new methods for testing in the laboratory and maintains detailed records of development, interpretation and results.
Maintains clear and organized electronic laboratory notebook (ELN), documenting protocols, reagent preparation, and results of all experiments performed in real time.
Reviews and QCs analytical data using manual and automated pipelines and uses analytical abilities to make decisions regarding the accuracy of results.
Performs all responsibilities in adherence with regulatory principles and best laboratory practices such as GLP/GCP.
Performs all responsibilities in adherence with regulatory principles and best laboratory practices such as GLP/GCP.
Establishes excellent working relationships with key collaborators throughout the organization and communicates effectively through appropriate channels and tools.
Demonstrates the ability to complete projects in a communicative and timely manner under regulatory guidance.
Maintains safe and efficient procedures in the laboratory.
Supports the organization, tracking, and storing of specimens.
Supports management of lab consumables, including ordering, receiving, and storage of consumables.
Demonstrates the ability to learn complex tasks with instruction and to apply this to perform a variety of new techniques.
Other duties as assigned