Bioinformatics Software Engineer

MyOmeSan Francisco, CA
$130,000 - $160,000Hybrid

About The Position

MyOme is looking for a talented and experienced bioinformatics software engineer to join the team. As a Bioinformatics Software Engineer, you will build scalable, cloud-based pipelines that power genomic and clinical data analysis in a real-world healthcare setting. You will combine strong engineering practices with bioinformatics expertise to develop reliable, production-grade systems that support clinical decision-making and advance precision medicine.

Requirements

  • 2+ years of experience building and managing bioinformatics workflows (e.g., Nextflow, Snakemake, WDL, CWL).
  • Proven experience optimizing and scaling bioinformatics pipelines for performance and reliability.
  • Proficient in Python, with bonus points for experience in other programming languages.
  • First-hand experience working with bioinformatics tools, databases, and file formats used in sequence analysis.
  • Comfortable with modern development practices - version control, unit testing, CI/CD, and code reviews.
  • Hands-on experience with Linux/Unix and cloud infrastructure (AWS, Docker, Kubernetes, etc.).
  • Thrive in a fast-moving startup - you know when to prototype quickly and when to build production-grade systems.

Nice To Haves

  • No specific degree required - if you can do the work well and collaborate with humility, we want to hear from you.

Responsibilities

  • Build, test, and maintain a suite of robust bioinformatics tools, workflows, and analysis modules.
  • Work in a team to scope, define, and articulate solutions to complex computing and information management challenges at the forefront of modern bioinformatics.
  • Contribute to the architecture and operations of our computing infrastructure.
  • Contribute to the team through code reviews and design discussions.
  • Participate in agile development processes, including sprint planning, retrospectives, and continuous improvement.
  • Balance quick wins with long-term technical sustainability.
  • As a well-rounded engineer, participate in all aspects of the development process and be interested in our mission.

Benefits

  • Comprehensive healthcare coverage (Health, Dental, and Vision)
  • 401K
  • Unlimited PTO
  • Professional development opportunities
  • Company-sponsored off-sites and team meals during in-person meetings
  • Direct access to company leadership and the opportunity for career growth
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