Bioinformatics Associate I

Zymo Research Corporation•Tustin, CA

9d•Onsite

About The Position

Zymo Research is seeking a highly motivated individual to join our Bioinformatics team! The successful candidate will play a key role in microbiome data analysis and in developing tools, pipelines and databases related to microbiome applications. The candidate will perform regular analyses of different bioinformatics pipelines, address bioinformatics support needs for customers and partners, and collaborate closely with other colleagues in developing microbiome/metagenomics applications. As part of the Bioinformatics team, you will leverage your skills and familiarity with NGS-based cutting-edge data science methods in data collection, analysis and statistical modeling for exciting research and application projects! Join us in making a meaningful impact!

Requirements

Holds a master’s or bachelor's degree in Bioinformatics or a related discipline.
Bioinformatics or metagenomics data analysis experience may substitute for education.
Must have experience and passion in the field of bioinformatics, metagenomics, microbiomics and NGS data analysis.
Must have experience with Linux/Unix operating systems and running/scripting applications from the command line.
Proficient with scripting languages including Python and R.
Demonstrable best practices for code documentation and revision control.
Demonstrate clear verbal & written communication skills.
Well-developed people skills are highly desirable.

Nice To Haves

Experience with HPC environments (SLURM) and/or Amazon Web Services EC2 and S3 is a plus.
Experience with nextflow is a plus.
Experience with AI coding assistant and AI workflows is a plus.

Responsibilities

Run bioinformatics pipelines or analyses and deliver reports to customers and partners.
Provide support or training for report interpretation.
Perform custom analysis with existing pipelines to fit different application needs.
Follow SOPs strictly when processing data from clinical partners.
Participate in bioinformatics research and development under the guidance of bioinformatics scientist in developing new microbiome pipelines or applications. Typical tasks include algorithm selection and optimization, database curation, AI function integration, report design, report scripting, and portal development.
Work closely with wet lab scientists to help troubleshoot microbiomic lab workflows.
Optimize existing pipelines to automate the workflow, reduce computational burden, shorten runtime, improve QC criteria, improve report graphics and UI, etc.
Stay current with the latest advancements in bioinformatics, machine learning, and artificial intelligence in data analysis and interpretation.
Employ best practices for source control, statistical accuracy, documentation, and reproducibility.