University of South Florida-posted 1 day ago
Full-time • Mid Level
Onsite • Tampa, FL
5,001-10,000 employees

This position reports to the USF Genomics Program Director and the Genomics Sequencing Core Director. The candidate will provide guidance, scientific and technical support to projects involving Next Generation Sequencing (NGS) and assist in management of the USF Genomics Program Core laboratory. The candidate will deliver high-quality sequencing services, including advanced single-cell and spatial sample preparation and sequencing. Responsibilities include QC of DNA, RNA, and single-cell samples, library preparation, spatial genomics method sequencing setup, and data delivery. Spatial genomics methods are cutting-edge techniques that require extensive training to perform. The ideal candidate will be responsible for, but not limited to: (1) library preparation sequencing; (2) operating sample prep and sequencing instrumentation; (3) NGS data analysis; (4) assist in genomics training; (5) NSG equipment maintenance and lab organization; and (6) documentation duties will include keeping detailed records of experiments and sequencing data using the lab management software (iLab). The candidate must be able to manage simultaneously several projects with varying priorities and coordinate between multiple groups. He/she must have excellent communication and interpersonal skills.

  • Perform Next-Generation Sequencing (NGS) sample preparation and sequencing, including single-cell RNA-seq (scRNA-seq, snRNA-seq) and spatial transcriptomics (Visium HD) workflows, DNA/RNA library construction, Illumina sequencing, Nanopore sequencing, and Visium HD tissue sample preparation.
  • Operate and maintain high-throughput sequencing instruments (e.g., Illumina NovaSeq X, MiSeq i100) and single-cell systems (e.g., 10x Genomics Chromium X, Visium CytAssist).
  • Manage and prioritize daily laboratory workflow to ensure timely project completion within standard operating hours.
  • Conduct quality control (QC) assessments for RNA/DNA samples and sequencing libraries to ensure accuracy and integrity.
  • Work closely with core users and internal team to troubleshoot, optimize protocols, and achieve consistent, high-quality results.
  • Maintain accurate documentation in iLab, including experimental records, billing, reagent usage, and equipment logs, ensuring compliance with institutional standards.
  • Contribute to laboratory training, SOP development, and continuous process improvement initiatives to enhance efficiency and performance.
  • This position requires a Bachelor's degree in a natural or medical science and 2 years of research experience; or a Master's degree in a natural science.
  • Progressively responsible experience involving scientific laboratory or field work may be substituted for the Bachelor's degree.
  • Hands-on experience with NGS workflows, including DNA/RNA sequencing, single-cell, and spatial transcriptomics assays.
  • Master’s degree in Molecular Biology, Genomics, or a closely related field, and at least two (2) years of professional experience in a research or technical laboratory
  • Hands-on experience with Illumina and/or Nanopore sequencing platforms.
  • Strong organizational and time-management skills to maintain daily operational efficiency and meet project deadlines.
  • Excellent teamwork, communication, and documentation skills.
  • Experience with 10x Genomics Chromium or Visium HD platforms is highly desirable.
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