Bioinformatician III

Seneca Holdings-posted 2 days ago
Full-time • Mid Level
Atlanta, GA
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Great Hill Solutions, LLC seeks a highly skilled Bioinformatician III to support the CDC. This role is critical for conducting genomic epidemiologic studies, developing bioinformatics pipelines, and analyzing next-generation sequencing data to support public health surveillance and response efforts.

  • Develop standard operating procedures and quality documentation for sequence analysis pipelines.
  • Provide technical assistance to integrate bioinformatics workflows with existing platforms in CORVD programs.
  • Conduct production-level quality control and analysis on next-generation sequencing data produced locally and from outside labs.
  • Provide technical assistance on tasks related to genomic epidemiologic studies on the evolution of viruses.
  • Apply analytical and interpretive skills to analyze next generation sequence data from global surveillance of viruses.
  • Provide data management and analytic support for global surveillance platforms.
  • Construct pipelines and workflows for sequence analysis and build custom algorithms and tools for specific problems.
  • Conduct genomic epidemiologic studies on the evolution of viruses to detect and assess the risk of new emerging variants to current vaccines.
  • Analyze next generation sequence data using spatiotemporal, phylodynamic, and epidemiologic approaches.
  • Use mathematical and computational approaches to understand the evolutionary and epidemiological patterns of viruses.
  • Ensure appropriate genomic analysis methods, procedures, techniques, and quality controls are correctly conducted.
  • Prepare reports, summaries, presentations, papers, and other documents to highlight findings and surveillance data.
  • Contribute to abstracts, presentations, and peer-reviewed publications from related projects and studies.
  • MS with 10+ years’ experience or PhD with 7-10+ years’ experience.
  • Interpersonal communication: telephone, email, and business etiquette.
  • Strong proofreading skill and attention to detail.
  • Strong organizational skills.
  • Experience working with CDC staff at multiple organizational levels.
  • Work experience in the scientific field, including physician, epidemiologist, clearance reviewer, or related field (preferably in a public health setting).
  • Mastery of at least one general purpose, widely used scripting or programming language (e.g., Python, Perl, Rust).
  • Working knowledge of database Structured Query Language (SQL).
  • Familiarity with analytics languages or tools such as R or Pandas.
  • Familiarity with pipelining tools such as Nextflow or Snakemake.
  • Familiarity with fundamentals of nucleic acid sequence alignment and comparison.
  • Knowledge and experience of phylogenetic analysis.
  • Knowledge of and experience working with clinical data.
  • Experience working with CDC staff at multiple organizational levels.
  • medical, dental, vision, life, and disability
  • voluntary benefit programs (critical illness, hospital, and accident)
  • health savings and flexible spending accounts
  • retirement 401K plan
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